Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41177g00001 AATGACAATGAAAGCAACATTAGCATTAAGCATCCAACTCGTAGTCATTTGAGTGTATATTCTTCGCAAGGTTTCCGGACTCTTGAAATTGCCTCAAGGGATCTTTCAGATGCAGAACTACTGTGGCAAAGCATGTATGAAGAGGTGTATCTGGAAGGTGTACCAGAAGCCATTGAGTCTCTACTGCAAGCTGGAGTTAATGTATGGATTCTTCTTACTGGTGATAAGCAAGAGGCTGCAATTTCATTTAGCGTTTCATGCAAACTTCTCAATGCAAATATGCAGAAGATAATAAAGGGTACCTCAGAGGTTGAATGCAGAAACCTCTTGGCTGATGCTAGAGAAAAAATTGGTGTGAGATCTTCACGTGGAGAACATCATAATCTAAAGCACAAAACCAATGCCAGACATGGTGATCTTGATATTCCCAATGATACAAAGTCATCAAGCATCCAAGTCCAAGTGGGAATCTAG 474 0.4051 NDNESNISIKHPTRSHLSVYSSQGFRTLEIASRDLSDAELLWQSMYEEVYLEGVPEAIESLLQAGVNVWILLTGDKQEAAISFSVSCKLLNANMQKIIKGTSEVECRNLLADAREKIGVRSSRGEHHNLKHKTNARHGDLDIPNDTKSSSIQVQVGI 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41177g00001 157 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 52 125 - -
Trme41177g00001 157 Gene3D - 44 152 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme41177g00001 Trme-Chr41177 282 852 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41177g00001 3 118 Primary Pumps ATPases AT5G04930 36.424 3.84e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41177g00001 K14802 - gmx:100789830 177.948