Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41104g00001 TGTGATCTGAACCTACTACGAGCAACATTATGTACTCGTACAATACAAACCCGCGAAGGAAATATTGTCAAAGCTCTTGATTGCAATGCTGCTGTTGCTGGCAGGGATGTTTTGGCGAAAACCGTCTATGCTCGTTTGTTTGATTGGCTTGTTGATAAGATCAATAAAACGGTTGGGCAAGATATCAATTCCAGGATGCAAATTGGAATATTGGATATATATGGCTTTGAGTCTTTTAAGGATAACAG 248 0.3952 CDLNLLRATLCTRTIQTREGNIVKALDCNAAVAGRDVLAKTVYARLFDWLVDKINKTVGQDINSRMQIGILDIYGFESFKDN 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41104g00001 82 ProSiteProfiles Myosin motor domain profile. 1 82 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme41104g00001 82 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 82 IPR027417 -
Trme41104g00001 82 PANTHER MYOSIN 1 82 - -
Trme41104g00001 82 Pfam Myosin head (motor domain) 5 82 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme41104g00001 82 Gene3D Myosin VI head, motor domain, U50 subdomain 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme41104g00001 Trme-Chr41104 330 678 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41104g00001 1 82 Myosins gene family AT4G33200 76.829 5.36e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41104g00001 K10357 - gmx:100796413 150.984