Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41102g00001 CTTCCCGGAGACAACGGATTCGATCCANTGGGACTCGCCGAGGATCCAGAGAACTTGAAATGGTTTGTTCAAGCCGAGCTTGTAAACGGACGTTGGGCCATGTTAGGTGTTGCAGGGATGTTACTCCCTGAGGTCTTAACCAGCATTGGAATCATCAATGTTCCAAAATGGTATGATGCAGGGAAAGAAGAATACTTTGCTTCATCATCAACACTCTTTGTGATTGAGTTCATTTTGTTCCATTATGTTGAGATTAGAAGATGGCAAGACATTAAGAACCCTGGTAGTGTTAACCAAGATCCTATCTTTAAGCAATACAGCTTGCCAAAGGGTGAGGTTGGTTACCCTGGTGGAATTTTTAACCCTTTGAACTTTGCACCAACTTTGGAAGCTAAAGAGAAGGAAATTGCCAATGGTAAATGCTTTTTTCTCTCTAGTTATAGCTTAAGTATTGCATAA 459 0.4139 LPGDNGFDPXGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVLTSIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTLEAKEKEIANGKCFFLSSYSLSIA 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41102g00001 152 Pfam Chlorophyll A-B binding protein 1 139 IPR022796 -
Trme41102g00001 152 SUPERFAMILY Chlorophyll a-b binding protein 1 140 - -
Trme41102g00001 152 Gene3D Chlorophyll a/b binding protein domain 1 145 - -
Trme41102g00001 152 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 144 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme41102g00001 Trme-Chr41102 143 601 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41102g00001 1 145 Chloroplast and Mitochondria Gene Families AT3G61470 54.967 2.62e-53 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41102g00001 K08910 - rcu:8263414 282.337