Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41077g00001 ATGGCAATGATGATGAGTCATGACCATGTTGGGATGGAGAAACAAAAAGATTCATCACAAATTGAAGCATGTGCTATAGTCTATGGTTCGACAAAACCTGAATTTGAGCAAAGTAAGAAAAAATTGAATCAAGATGATTACTTGAAGCAGAGAATTGTGAAGGCCGAAGACCAACTAAAGAAGTTGAGGAAAGAAAATAGACAGAATGGGATGAAAGTGCTTATGTCAAATTATGACTCTGCTCCAACTCCAACTCCAACTCCAAGCCAACTCCAAATTACACCACCGCCACCACCAGCAGCAGCAACATCTAGCAATGGTGAAATGGCAATGATGATGAGTCATGGCCATGTTGGGATGACTGTGAATAATGATGACATCATGCAAACAGGATCGTTTATGGATTTGTTGAATGGAAATGGGGATGAGACAATTCCATTTGGTCAGCCTCATGATGCCAATCTTCAAGATGGATTTTGGCATAACATACTTCCTTGA 498 0.4016 MAMMMSHDHVGMEKQKDSSQIEACAIVYGSTKPEFEQSKKKLNQDDYLKQRIVKAEDQLKKLRKENRQNGMKVLMSNYDSAPTPTPTPSQLQITPPPPPAAATSSNGEMAMMMSHGHVGMTVNNDDIMQTGSFMDLLNGNGDETIPFGQPHDANLQDGFWHNILP 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41077g00001 165 MobiDBLite consensus disorder prediction 76 105 - -
Trme41077g00001 165 Coils Coil 45 72 - -
Trme41077g00001 165 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme41077g00001 Trme-Chr41077 207 911 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41077g00001 21 75 Type I MADS-box Gene Family AT5G48670 33.766 6.78e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41077g00001 - - mtr:11434260 85.1149