Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41062g00001 ATGCACTGCTTTGGGTATAGTGTGACTGAATTTTATAATGATCAACTGATTCAGGGACCTAAGTATCAAGAGATTGTTAATATTCGGTTAGGAGATGGAACTACGAGGCGTGGACAAGTTCTAGAAGTTGATGGCGAAAAAGCTGTTGTTCAGGTTTTTGAAGGTACATCTGGGATTGACAATAAATTCACAACTGTGCAATTTACCGGAGAG 213 0.3944 MHCFGYSVTEFYNDQLIQGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGE 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41062g00001 71 Gene3D - 12 71 - -
Trme41062g00001 71 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 17 71 IPR022879 -
Trme41062g00001 71 Pfam ATP synthase alpha/beta family, beta-barrel domain 20 70 IPR004100 GO:0046034|GO:1902600
Trme41062g00001 71 CDD ATP-synt_V_A-type_beta_N 17 71 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41062g00001 17 71 Primary Pumps ATPases(2) AT4G38510 94.545 3.44e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41062g00001 K02147 - twl:119982841 110.538