Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41059g00001 ATGCTGGCTTCAGAGTGGAAGAGACCTGGAATGCTGACCCATTTTACTGTTATTCGCAAACTTGATGGGAATATATTTCCAATGGGATTCAATACAGAGGTCACAGACAGAAACRTAAAAGCTGGGTCAAATGTTCTTTGTGTTGAAAGCAGTGAAAGAGCTTTGTTAAATCGTCTAATGTTACAATTACACAAGATGGATAGCGATGTTCTTGTTGGACATAATATTTCTGGATTTGATTTGGATGTTCTTCTCCACAGATCTCAG 267 0.382 MLASEWKRPGMLTHFTVIRKLDGNIFPMGFNTEVTDRNXKAGSNVLCVESSERALLNRLMLQLHKMDSDVLVGHNISGFDLDVLLHRSQ 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41059g00001 89 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 7 88 - -
Trme41059g00001 89 Gene3D - 3 89 IPR036397 GO:0003676
Trme41059g00001 89 Pfam DNA polymerase family B, exonuclease domain 31 89 IPR006133 -
Trme41059g00001 89 SUPERFAMILY Ribonuclease H-like 14 88 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme41059g00001 Trme-Chr41059 379 813 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41059g00001 1 89 Core DNA Replication Machinery Family AT5G67100 65.169 3.67e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41059g00001 K02320 - lja:Lj0g3v0214359.1 164.851