Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme41026g00001 | ATGCGTTACCTCGCGCACAACGGATTCTTCGAGATAATAAAAAATCAAGAACTGGAAAATGAAGAAGAAGAAGCTTATGCTCTCACTGTTGTTTCAGAACTTCTTGTTAAAGGAAGTGAACTTTGTTTAGCTCCAATGGTTGAGTGTGCTCTTGATCCAACATTTTCATCTTCATTTCATAAGTTCAAGAAATGGATTTATGANNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTTTCTTAATGAAAATCCTAAATATAATACAATGTTTAATGATGCAATGGCTAGTGATTCCAAAATGATAAATTTGGCATTGAAAGATTGTGATTTTGTGTTTGAAGGGTTGGAATCAATTGTTGATGTTGGTGGTGGAAATGGAACAACTGCTAAGATTATTTGTGAGAAATTTCCTAAGTTGAATTGTGTTGTGTTTGATAGGCCAAAGGTTGTTGAGAATTTATCTCAAAGTGACAATTTGACTTATGTTGGTGGGGACATGTTCACATATGTTCCTAAAGCTGATGCTGTTCTGCTTAAG | 555 | 0.3135 | MRYLAHNGFFEIIKNQELENEEEEAYALTVVSELLVKGSELCLAPMVECALDPTFSSSFHKFKKWIYXXXXXXXXXXXXXXXXXFLNENPKYNTMFNDAMASDSKMINLALKDCDFVFEGLESIVDVGGGNGTTAKIICEKFPKLNCVVFDRPKVVENLSQSDNLTYVGGDMFTYVPKADAVLLK | 185 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme41026g00001 | 185 | Coils | Coil | 85 | 89 | - | - | |
Trme41026g00001 | 185 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 41 | 184 | IPR029063 | - | |
Trme41026g00001 | 185 | Gene3D | Vaccinia Virus protein VP39 | 83 | 185 | IPR029063 | - | |
Trme41026g00001 | 185 | Gene3D | - | 1 | 70 | IPR036388 | - | |
Trme41026g00001 | 185 | Pfam | O-methyltransferase domain | 87 | 185 | IPR001077 | GO:0008171 | |
Trme41026g00001 | 185 | PANTHER | O-METHYLTRANSFERASE | 1 | 184 | IPR016461 | GO:0008168 | |
Trme41026g00001 | 185 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 1 | 185 | IPR016461 | GO:0008168 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme41026g00001 | Trme-Chr41026 | 34 | 588 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme41026g00001 | 85 | 185 | Monolignol Biosynthesis Gene Families | AT5G54160 | 40.594 | 1.29e-21 | 88.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme41026g00001 | K22588 | - | ag:AAC49926 | 263.462 |