Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41026g00001 ATGCGTTACCTCGCGCACAACGGATTCTTCGAGATAATAAAAAATCAAGAACTGGAAAATGAAGAAGAAGAAGCTTATGCTCTCACTGTTGTTTCAGAACTTCTTGTTAAAGGAAGTGAACTTTGTTTAGCTCCAATGGTTGAGTGTGCTCTTGATCCAACATTTTCATCTTCATTTCATAAGTTCAAGAAATGGATTTATGANNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTTTCTTAATGAAAATCCTAAATATAATACAATGTTTAATGATGCAATGGCTAGTGATTCCAAAATGATAAATTTGGCATTGAAAGATTGTGATTTTGTGTTTGAAGGGTTGGAATCAATTGTTGATGTTGGTGGTGGAAATGGAACAACTGCTAAGATTATTTGTGAGAAATTTCCTAAGTTGAATTGTGTTGTGTTTGATAGGCCAAAGGTTGTTGAGAATTTATCTCAAAGTGACAATTTGACTTATGTTGGTGGGGACATGTTCACATATGTTCCTAAAGCTGATGCTGTTCTGCTTAAG 555 0.3135 MRYLAHNGFFEIIKNQELENEEEEAYALTVVSELLVKGSELCLAPMVECALDPTFSSSFHKFKKWIYXXXXXXXXXXXXXXXXXFLNENPKYNTMFNDAMASDSKMINLALKDCDFVFEGLESIVDVGGGNGTTAKIICEKFPKLNCVVFDRPKVVENLSQSDNLTYVGGDMFTYVPKADAVLLK 185
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trme41026g00001 185 Coils Coil 85 89 - -
Trme41026g00001 185 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 41 184 IPR029063 -
Trme41026g00001 185 Gene3D Vaccinia Virus protein VP39 83 185 IPR029063 -
Trme41026g00001 185 Gene3D - 1 70 IPR036388 -
Trme41026g00001 185 Pfam O-methyltransferase domain 87 185 IPR001077 GO:0008171
Trme41026g00001 185 PANTHER O-METHYLTRANSFERASE 1 184 IPR016461 GO:0008168
Trme41026g00001 185 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 185 IPR016461 GO:0008168
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trme41026g00001 Trme-Chr41026 34 588 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41026g00001 85 185 Monolignol Biosynthesis Gene Families AT5G54160 40.594 1.29e-21 88.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41026g00001 K22588 - ag:AAC49926 263.462