Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme410172g00001 GGAAATACTCTTGAGGTGCTTCATCAATTTGCTCGTCGTGACATGGAAAAACAGCACAGTTATGTTAGGAAGACTGCAGAACTTGCTACCCAGCATTTCATCAACCCTGCTACTAGTCAGCCTAATGTTGCTGGACTCATACTTGCTCGTTCGGCTGACATCAAGACTGAGCTGAGCCAGTCAGATATGTTTGATCGTCGTTTGCAAGCAAAAATATTGAACGTGGTTGAGGTTGCCCATGGTGGG 246 0.4593 GNTLEVLHQFARRDMEKQHSYVRKTAELATQHFINPATSQPNVAGLILARSADIKTELSQSDMFDRRLQAKILNVVEVAHGG 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme410172g00001 82 Gene3D eRF1 domain 2 1 82 IPR042226 -
Trme410172g00001 82 Pfam eRF1 domain 2 8 82 IPR005141 -
Trme410172g00001 82 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 8 82 IPR004403 GO:0003747|GO:0006415
Trme410172g00001 82 SUPERFAMILY Translational machinery components 9 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme410172g00001 Trme-Chr410172 58 303 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme410172g00001 1 82 Eukaryotic Initiation Factors Gene Family AT5G47880 66.000 1.30e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme410172g00001 K03265 - dcr:108225910 125.561