Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41016g00001 ATGATATCAATGAAATTTATGTACGCATCTCAGTTCCTAACTCTCATAACATTGCGTCTGTTGCGTGGCGGGAATACTTACACTGGGAGTATATTGATTGCTGTGAACCCTTTCATAAAGCTGCCTCATTTATACGATAGCCATATGATGGCACAATATAAAGGTGCAGGTTTTGGTGAGTTAAGTCCACACCCCTTTGCTGTTGCAGACACAGCGTATAGTGGTGAAAGTGGAGCCGGTAAAACAGAAAGTACTAAGTTACTCATGCGATATCTTGCTTACATGGGGGGGAGAGCCACTGTTGCTGAAGGTAGAACTGTCGAGCAAAAAGTCCTTGAGTCAAATCCTGTCCTAGAAGCCTTTGGCAATGCAAAGACTGTGAGGAACAATAATTCAAGTCGTTTCGGTAAGTTTGTGGAGATCCAATTTGATAAAAAAGGAAGAATATCAGGCGCTGCTATCAGAACCTATCTGCTGGAAAGATCACGTGTTTGCCAGGTGTCAGATCCCGAGAGGAATTATCACTGTTTCTACATGCTCTGTGCTGCACCTCCAGAGGTAA 562 0.4342 MISMKFMYASQFLTLITLRLLRGGNTYTGSILIAVNPFIKLPHLYDSHMMAQYKGAGFGELSPHPFAVADTAYSGESGAGKTESTKLLMRYLAYMGGRATVAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41016g00001 187 PRINTS Myosin heavy chain signature 116 143 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme41016g00001 187 PRINTS Myosin heavy chain signature 68 93 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme41016g00001 187 PRINTS Myosin heavy chain signature 25 44 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme41016g00001 187 SMART MYSc_2a 7 187 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme41016g00001 187 Gene3D Kinesin motor domain 1 186 IPR036961 -
Trme41016g00001 187 ProSiteProfiles Myosin motor domain profile. 1 187 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme41016g00001 187 Pfam Myosin head (motor domain) 26 183 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme41016g00001 187 PANTHER MYOSIN 25 186 - -
Trme41016g00001 187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 182 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme41016g00001 Trme-Chr41016 1 1014 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41016g00001 26 186 Myosins gene family AT5G43900 85.714 4.94e-98 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41016g00001 K10357 - tpra:123898663 312.383