Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme4099g00001 GCGAATGGTTATCTTGGTGGATTACTCTCTAAATATAGCACTGCTGCTGCCTTTGATGAACAAACAATTAAACCATCAGTGCAAGTAGAACACACACAACTCTTAATTGATGGCAAATTTGTAGATGCTGCTGCTGGTAAAACATTTCCAACATTGGATCCAAGGACCGGGGAAGTGATTGCTCATGTTGCTGAGGGTCACTCTGAAGATGTTGATAGAGCTGTTGCAGCTGCACGCAAAGCATTCGATCTAGGGCCGTGGCCTAAGTTGCCAGCCTATGAAAGGCAAAAGATATTGTTGCGTGCTGCTGATCTGATTGAAAAGCATAATGACGAAATTGCAGCACTTGAGACTTGGGATAATGGGAAGCCATACGAACAATCTGCTCAAATTGAAATTCCAATGCTTGTTCGCCTATTTCGTTACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCAGCTGATGGACAGTATCATGTGCAGACATTGCACGAACCAATCGGTGTTGCTGGTCAGATCATTCCATGGAACTTCCCTCTTCTCATGTTTGCTTGGAAGGTGGGACCTGCATTAGCATGTGGCAACACTGTTGTTCTGAAAACTGCCGAGCAGACACCATTGTCTGCTTTTTATGTGGCAAAACTATTTCATGAGGCTGGACTTCCTCCTGGTGTGTTGAATATTGTGTCTGGCTTTGGTCCAACTGCCGGTGCTGCTCTTGCTAGTCACATGGATGTAGATAAGCTTGCATTTACTGGCTCAACCGATACCGGAAAAGTTGTCCTTCAACTGGCAGCTAAAAGCAATCTTAAACCTGTAACTTTGGAGCTTGGTGGGAAATCTCCGTTTATTGTTTGTGAAGATGCTGATATAGATGAAGCTGTTGAGCTAGCTCACTTTGCCTTATTCTTCAACCAGGGACAATGTTGTTGTGCTGGCTCTCGAACGTTTGTACATGAACGTGTGCATGATGAGTTTGTCGAGAAAGCAAAGGCCCGCGCTTTGAAACGTGCTGTTGGCGATCCATTCAAGTCAGGAACAGAGCAAGGTCCTCAGGTAAA 1070 0.4495 ANGYLGGLLSKYSTAAAFDEQTIKPSVQVEHTQLLIDGKFVDAAAGKTFPTLDPRTGEVIAHVAEGHSEDVDRAVAAARKAFDLGPWPKLPAYERQKILLRAADLIEKHNDEIAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADKIHGLTVPADGQYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAEQTPLSAFYVAKLFHEAGLPPGVLNIVSGFGPTAGAALASHMDVDKLAFTGSTDTGKVVLQLAAKSNLKPVTLELGGKSPFIVCEDADIDEAVELAHFALFFNQGQCCCAGSRTFVHERVHDEFVEKAKARALKRAVGDPFKSGTEQGPQV 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme4099g00001 356 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 17 356 - -
Trme4099g00001 356 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 281 IPR016162 GO:0016491
Trme4099g00001 356 SUPERFAMILY ALDH-like 26 356 IPR016161 GO:0016491
Trme4099g00001 356 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 306 317 IPR016160 GO:0016491
Trme4099g00001 356 Pfam Aldehyde dehydrogenase family 41 356 IPR015590 GO:0016491
Trme4099g00001 356 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 278 285 IPR029510 GO:0016491
Trme4099g00001 356 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 36 297 - -
Trme4099g00001 356 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 282 356 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme4099g00001 Trme-Chr4099 217 2277 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme4099g00001 2 356 Aldehyde Dehydrogenase Gene Family AT3G48000 81.408 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme4099g00001 K00128 - gmx:100777399 652.129