Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme40979g00001 ATGAAGGTGGCATTGGCACTTTTGGTTGTGGTACTTTGTATTGGACTTGGTGTAGGGGTTATGCATTTTGTCGAAAGGCTTGGATGGGTGGATTCTTTTTATCTTTCAGTTATGTCTGTTACAACGGTTGGATATGGTGATCATGCTTTTAAGACCATGCATGGTCGTATTTTTGCTGCAATTTGGTTGCTTGTGTCGACGCTTGCAGTGGCCCGAGCATTCCTTTATTTGGCTGAGGCGAGAGTGGATAAGCGGCATAGGATGATGGCAAAGTGGATTCTTGGTCAGGATATGACTGTTGCTGAGTTTCTTGCTGCTGACATAGACAATAATGGATTTGTGAG 344 0.439 MKVALALLVVVLCIGLGVGVMHFVERLGWVDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRMMAKWILGQDMTVAEFLAADIDNNGFV 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme40979g00001 114 Pfam Ion channel 7 78 IPR013099 -
Trme40979g00001 114 FunFam Two-pore potassium channel 2-like 1 106 - -
Trme40979g00001 114 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 2 101 IPR003280 GO:0005267|GO:0016020|GO:0071805
Trme40979g00001 114 Gene3D - 1 99 - -
Trme40979g00001 114 SUPERFAMILY Voltage-gated potassium channels 2 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme40979g00001 Trme-Chr40979 668 1011 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme40979g00001 1 114 Ion Channels AT4G18160 77.193 2.30e-59 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme40979g00001 K05389 - lja:Lj4g3v0281190.3 210.69