Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme40936g00001 ATGGGAATATATGAGAAGGGGTTTGAAAGGCCATCCCCAATCCAAGAAGAAAGCATTCCAATTGCCCTTACTGGTAGTGACATTCTTGCTAGGGCTAAAAATGGAACAGGCAAAACAGCTGCGTTTTGCATTCCTGCATTGGAAAAAATTGATCAAGATAATAATATTATTCAAGGTGGGCTTCCTTCTCTTTGTTTACATGATGCTCTGAAGTCTAGTAGAGATGATTATGCCTTGTTTTGTCTCAGCGGCAGCGCTCAGCAGTCTTTTCTTATTAAATTTTAA 285 0.393 MGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNIIQGGLPSLCLHDALKSSRDDYALFCLSGSAQQSFLIKF 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme40936g00001 94 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 55 IPR027417 -
Trme40936g00001 94 Gene3D - 1 82 IPR027417 -
Trme40936g00001 94 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 1 58 - -
Trme40936g00001 94 Pfam DEAD/DEAH box helicase 13 52 IPR011545 GO:0003676|GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme40936g00001 2 51 Eukaryotic Initiation Factors Gene Family AT5G11200 46.000 7.23e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme40936g00001 K12614 - ghi:121222337 124.02