Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme40842g00001 GATGGAAGAAGGGATGATAGTGTGTATGATCAACTTGAACAAGCTATGGCTGAGGCTGAGAAAGCTAGGTGGGATGCGTATCAAGAAACTGTTAGGCGTCGAAAAGCTGAAAAAGATGTCATGGATGTGATACGCAAGACTAAAGACAACAAAATCTTGTACGAAGAAGAGGTGAAACTACGGAAAGTTTTAGAGGAAGCGCTAGAGAAAGCAAAAGAAGAAATTGACAACATGAGAAGCCAAATAGAAATAATCAATAAGGAACTCGAACTTGCCTTGGATCACAAGTCATCGCCAGAGAATCAAATTGGTGCAGCCTCAAGAACACAATCTCTTCAACTTTTGTCAGAGTTCTCTTTTTCAGAGATTGAAAAAGCAACATGTAACTTCAATCCATCGTTAAAGATTGATGAAG 415 0.3928 DGRRDDSVYDQLEQAMAEAEKARWDAYQETVRRRKAEKDVMDVIRKTKDNKILYEEEVKLRKVLEEALEKAKEEIDNMRSQIEIINKELELALDHKSSPENQIGAASRTQSLQLLSEFSFSEIEKATCNFNPSLKIDE 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme40842g00001 138 Coils Coil 54 95 - -
Trme40842g00001 138 Coils Coil 9 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme40842g00001 Trme-Chr40842 9 662 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme40842g00001 5 138 U-box Gene Family AT2G45910 31.319 1.78e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme40842g00001 - - tpra:123883511 217.238