Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme40840g00001 GTCCCTCCTATGATAACAAGGAAGATATTTAGTCAGGTTTTCTCATACATGAATGTTCAACTCTTTAATAGCAATGGAGAATATTTGAAGGCAGGTTTGCATGAGTTGGAACAATGGTGTCTCAAAGCAACAGATCAGATTGCAGGGTCATCTTGGGATGAACTCAAACATATACGCCAAAGTGTTGGATTTCTGGTTTTGCATCAAAAGACTCAAAAATCTTTGGACGAGATCACAAATGAGCTCTGCCCG 252 0.3968 VPPMITRKIFSQVFSYMNVQLFNSNGEYLKAGLHELEQWCLKATDQIAGSSWDELKHIRQSVGFLVLHQKTQKSLDEITNELCP 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme40840g00001 84 ProSiteProfiles Dilute domain profile. 1 84 IPR002710 -
Trme40840g00001 84 SMART DIL_2 8 84 IPR002710 -
Trme40840g00001 84 Pfam DIL domain 8 84 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme40840g00001 Trme-Chr40840 131 716 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme40840g00001 1 84 Myosins gene family AT5G20490 64.211 5.00e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme40840g00001 K10357 - gmx:100786418 157.147