Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme408257g00001 CTTGTTGTATTCTCACCTAGTGGGAAGGCATTTTCCTTTGGTCATCCCAATGTTGATACAATGATAGATCGCTATCTCTCTCAAGTCATACCCCAAAACAACGACACCATGCAATTCATTAAGGCTCGTCGTAGCGCAAACGTGAGTGCGATCAATGCTCATCTGACACAAATTAACAACATGTTGGATGACGTGAAAAAGCATGGTGATGAGCTGAGCCATTTTCTCAAGGAGATCAATGCTTTACTTTGGTGGGCTTGTCCAATTGGTGGGATGAATGGAGGAGCTTAA 291 0.433 LVVFSPSGKAFSFGHPNVDTMIDRYLSQVIPQNNDTMQFIKARRSANVSAINAHLTQINNMLDDVKKHGDELSHFLKEINALLWWACPIGGMNGGA 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme408257g00001 96 Gene3D - 1 50 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme408257g00001 Trme-Chr408257 2 292 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme408257g00001 1 89 Type I MADS-box Gene Family AT5G60440 43.478 6.76e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme408257g00001 - - mtr:11438274 138.272