Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme40794g00001 ATGCAAGAAGTTTTGCCACTACCGGAAGGTGTACAAAGTTTCAACCCCTCAGATTATGTTTCATTTGGATTTGGAGGTGATGGTGCCTTTGGTGCTATTGATAAGGTTAAGCTTAAGCATATTGTCTCTGGTGACACATATGCTCTAAAAAAGTTTGCTTTTACAAATGAAAGAGATAGGGATGTGGCTTCTAACGAGCTGGAGATGTTGAAATCGTTGAATAATGAAAATGTAGTTGGCTGTTTAGGTTTGTATTCAGCTCCGGGTGAGATAAGGATTTTGATGGAACTGATGGACTCGGATATGACGACTTTTACGAGTAAAGATGAGAAATTGCTAGCTAAGGTTGCGGTTAAGGTGTTGAGTGGGTTGAAATATCTTAGAGATAACTCGATTTTGCATCTGGATATAAAGCCGGCAAATTTGTTGAGTAAATCGGGAACTGATGTGATTAAAATTGCTGATTTCGGTTGTAGTATTAACTTGTCTGCCGCTGCGGGCAAACTATGGAATTTCCATGTTGCAATTTTTTGA 534 0.3895 MQEVLPLPEGVQSFNPSDYVSFGFGGDGAFGAIDKVKLKHIVSGDTYALKKFAFTNERDRDVASNELEMLKSLNNENVVGCLGLYSAPGEIRILMELMDSDMTTFTSKDEKLLAKVAVKVLSGLKYLRDNSILHLDIKPANLLSKSGTDVIKIADFGCSINLSAAAGKLWNFHVAIF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme40794g00001 177 SUPERFAMILY Protein kinase-like (PK-like) 13 164 IPR011009 -
Trme40794g00001 177 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Trme40794g00001 177 Pfam Protein kinase domain 26 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme40794g00001 177 Gene3D Transferase(Phosphotransferase) domain 1 97 172 - -
Trme40794g00001 177 SMART serkin_6 19 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme40794g00001 177 ProSiteProfiles Protein kinase domain profile. 19 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme40794g00001 177 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 26 163 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme40794g00001 11 159 MAP Kinase Kinase Gene Family AT1G51660 39.735 5.45e-22 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Trme40794g00001 Pkinase 1.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme40794g00001 K13413 K20604 twl:119992005 91.6633