Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme40762g00001 GCAGTGGAGAAAACTGCATCTCATCCTATAGCAAAGGCTATCATTAATAAAGCCGAGTCATTAGAGTTGGTCCTTCCACTCACAAAAGGACAGATAGTTGAACCAGGTTTTGGAACCTTGGCAGAAGTAGATGGGCGTTTGGTTGCAGTTGGGTCTTTAGAATGGGTTCATGAACGTTTCAAAACTAAAATGAACCCATCTGATTTGATGAATCTTGAACGTTCTTTGATGAATCATTCATTGAGTACATCTTCTTCGAAGTATTCGAAAACTGTTGTCTACGTTGGACGTGAAGGAGAAGGCATAATTGGTGTTATTGCCATATCTGACATTGTGCGTGAAGATGCTGAATCTACTGTAACGAGGCTCAAGAAGAGGGGGATTATAACAGTCCTCTTATCCGGAGACAGGGAAGAGGCAGTTGCAACAATAGCAGAGACAGTTGGAATTGAAAATGATTTCGTCAAAGCATCCTTGTCTCCGCAGCAGAAATCTGCATTTATTTCATCTCTAAAAGCTGCTGGACATCATGTTGCGATG 540 0.4167 AVEKTASHPIAKAIINKAESLELVLPLTKGQIVEPGFGTLAEVDGRLVAVGSLEWVHERFKTKMNPSDLMNLERSLMNHSLSTSSSKYSKTVVYVGREGEGIIGVIAISDIVREDAESTVTRLKKRGIITVLLSGDREEAVATIAETVGIENDFVKASLSPQQKSAFISSLKAAGHHVAM 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme40762g00001 180 PANTHER ATP7, ISOFORM B 1 180 - -
Trme40762g00001 180 Gene3D - 1 73 IPR023299 GO:0000166
Trme40762g00001 180 SUPERFAMILY HAD-like 33 180 IPR036412 -
Trme40762g00001 180 FunFam Copper-transporting ATPase PAA2, chloroplastic 1 112 - -
Trme40762g00001 180 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 1 99 IPR023299 GO:0000166
Trme40762g00001 180 Pfam haloacid dehalogenase-like hydrolase 6 180 - -
Trme40762g00001 180 Gene3D - 74 180 IPR023214 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme40762g00001 1 172 Primary Pumps ATPases AT4G30110 29.944 2.07e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme40762g00001 K17686 - gmx:100127402 293.893