Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme4075g00001 ATGGTAGAAGAAGGCGCCACAATCATGAAGATCGATAAGCCAAGAGGAATCGCCACAATGATTGCTGAAAAAATAAAAGCAAATGAGAGGTTTGCAGTATACATAGTTATTCCAATGTGGCCAGAGGGTGTTCCAACAGGAGCTGCCACTCAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTACGAGACAATTTATAACGCTTTGGTTGAAGTTGGGCTCGAAGCAGCATTCTCTCCACAAGACTATTTGAACTTTTTCTGTCTTGGAAATCGAGAAGCCATAGACATTCATGAGAATATTACTGTATCTGGAATTCCTCCCCCACCAAATACTCCACAAGATATTGTGGCAATGTTCGGGGACGAAGACCCCACAGCAGTGTTATCAAAATCGCGAGTCAACTCGCTGAATCGGACAA 430 0.4209 MVEEGATIMKIDKPRGIATMIAEKIKANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYNALVEVGLEAAFSPQDYLNFFCLGNREAIDIHENITVSGIPPPPNTPQDIVAMFGDEDPTAVLSKSRVNSLNRT 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme4075g00001 143 PANTHER PHOSPHOLIPASE D 14 100 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme4075g00001 Trme-Chr4075 70 2149 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme4075g00001 14 117 Phospholipase D Gene Family (Wang group) AT2G42010 75.962 2.53e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme4075g00001 K01115 - lja:Lj0g3v0363499.1 191.43