Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme407284g00001 ATGCCACAAGCCCCTGGCATCCGCCCTCGAGTACGAGCAAGAAGAGGCCAAGCCACAGACCCCCACAGCATCGCTGAGAGGTTGCGTCGTGAAAGAATCGCGGAAAGAATGAAGGCATTACAGGA 125 0.568 MPQAPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQ 41
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme407284g00001 41 MobiDBLite consensus disorder prediction 13 41 - -
Trme407284g00001 41 MobiDBLite consensus disorder prediction 1 41 - -
Trme407284g00001 41 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 17 41 IPR011598 GO:0046983
Trme407284g00001 41 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 5 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme407284g00001 Trme-Chr407284 9 215 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme407284g00001 8 41 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 94.118 2.48e-16 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme407284g00001 - - gmx:100807570 72.4034