Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme406940g00001 GACGCCGCCGCCGGTGGTCTTTTCTACTATCTCTTCGGTTTTGCCTTTGCTTTCGGCGGACCATCCAACGGTTTCATCGGAAAACATTTCTTCGGTCTCAAAGACGTTCCAACCGTAGCTTTTGATTACAGTTATTTTCTCTATCAATGGGCTTTCGCCATAGCAGCCGCTGGTATCACTAGCGGCTCAATCGCCGAACGAACTCAGTTCGTTGCGTATCTTATTTACTCTTCTTTTCTAACAGGGTTTGTTTACCCTGTGGTTTCTCATTGGTTCTGGTCCGGTGATGGTTGGGCTAGCGCA 303 0.4818 DAAAGGLFYYLFGFAFAFGGPSNGFIGKHFFGLKDVPTVAFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSGDGWASA 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme406940g00001 101 SUPERFAMILY Ammonium transporter 3 99 - -
Trme406940g00001 101 Gene3D Ammonium transporter AmtB like domains 1 101 IPR029020 -
Trme406940g00001 101 Pfam Ammonium Transporter Family 1 100 IPR024041 GO:0008519|GO:0016020|GO:0072488
Trme406940g00001 101 PANTHER AMMONIUM TRANSPORTER 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme406940g00001 Trme-Chr406940 1 303 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme406940g00001 1 100 Inorganic Solute Cotransporters AT4G13510 91.000 3.38e-58 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme406940g00001 K03320 - egt:105950262 172.94