Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme406727g00001 GCGGCACCCAAGCCCAAACCCAAGAATCCTCTTGATCTTCTTCCTCCTAGCAAGATGGTATTGGATGATTGGAAAAGACTCTACTCTAACACTAAGACCAACTTCCGTGAGGTCGCAATCAAAGGTATTGGTGTGATTACATTCCTGTAG 150 0.4533 AAPKPKPKNPLDLLPPSKMVLDDWKRLYSNTKTNFREVAIKGIGVITFL 49
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme406727g00001 49 Pfam Elongation factor 1 gamma, conserved domain 6 34 IPR001662 GO:0003746|GO:0006414
Trme406727g00001 49 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 2 43 IPR044628 GO:0004364
Trme406727g00001 49 SUPERFAMILY eEF1-gamma domain 7 34 IPR036433 GO:0003746|GO:0006414
Trme406727g00001 49 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 7 44 IPR036433 GO:0003746|GO:0006414
Trme406727g00001 49 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 7 49 IPR001662 GO:0003746|GO:0006414
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme406727g00001 9 43 Eukaryotic Initiation Factors Gene Family AT1G57720 91.429 5.47e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme406727g00001 K03233 - mdm:103411290 77.0257