Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme4064g00001 GGGAACATGTCGTCAATGGGTGTGCCGAGAATTTCAAGCCAGATGATTCCTACACCGGGATTTACAGTCAACAGCAACCACTCACATATGAATATAGATTCATCTACTAATGGTAGTGTCTTTTCCAGTGCAGACTCTACTATGGTGCCACAGTCACAGCTGGAGCAGCAGAAACAGCACATTGGTGACCAAAGTCATGTATTGCCGAACCTTGGCAGCCAAATGAGTAGTGGAATGAGATCTGGCACTTCCGATGGCTATGCCTCAAACTATGCCAATTCCCCTAAACACATACATCAGCACTTTGATCAAAATCAGAAACCAGTAGTGCAGGGTGATGGATATGGATTGAATAATGTTGACCCTTTTGCTTCTGGAAACTTTTATGCATCTGCAACATCTTCTGGGTCTATGATGAATACTCAGAACACAAATTCAGTAAAATTGCCATCAATACCCAAAACTAGCTCATTGATCAGTGGTCACTCAAATTTGCATGGTATGCAGCAGGCTGCTCATATAAAGTCTCAAGCAATCAATCAATTGGAAAAGTTGAATTTTCAGTCTTCGTCGACTTCAAGGGATGCTCTTCTGCATTCTCAACAGCAGTATCCACAAAGGCCCCAGCAATTTCAACAGCCAGAGCAGTATTCACAATCACAGCAACAATTTCAATTGAAACTACATAGTCAACAGCCTCAGCATTTGGTCAACGATGATGCTTTCAATCAGTCTCAGTTGTCTTCCAATCTAGAAAACCAAGTGAAGTCAGAGCCTGGAATTGAGCACCATAAAGACCTACTCAATTCTCATGTTCCCGAACAGTTCCACATGTCTGAGATGCAGAATCAGTTCCAGCAAAATTCATCCGAAGATTGCTCTAGGAGTGCCCAATACATTTCCTTTCCATCTGGTCAGCACGATTTATCCTCATCAGCACCTCAAAATTCGCAACAAATGTTGCATCCACACCAATTGGTTGCAGAATCTCAAAATAAGTTCAGCTGCCTTACAGTTGGGGCACAATCCAATTCCAAATCGGTAGTTCTAAACCAATGGCCTGATTCACAAGATGGTAACCACATGTCTAACAATATTTCACATGACCAGCATCTCCATGTGGATTTTCATCAAAGAATATCAGGGAAGGATGAAGCCCATTGCAATAATTTATCATCAGATGTATCTATGGGCCAAGCTGTAGCTCCTAGAGGTGCAACTGAGTCACTAGACCCAGGAAGCGCTACCAAAAAGGCACACAGGAATCAACAAAGGTGGCTTTTATTTCTACTTCATGCTCGGAAATGTTCTGCTCCTGAAGGACGATGCCAAGAACATTCTTGTTCTAGTGCACGGAAGTTATGTAAGCACATTGATGGATGCACCCTGCGTCATTGTCCAGTCCCACGTTGTCATCATACCAGGGTATTGCTTCATCATTTCATACACTGCAAGGATCCGTGTTGCCCTGTTTGTGTTTTTGTAAAAAATTACCGGCGTGCATTTCAACTTAAGCCTCAAATTCAGCCAGAATCTGAATCAAGTTTGCCAAGTGTGGTAAATGGATCCTGTAAATCTTACAATATTACAGCTACATCATCTAGATTGATCTCAAAACCTACATTAGTTGTGGAAACTTCAGAAGACCTGCACCCATCTCTAAAACGCATTAAGATTGAGCATTGCACACAGTCTGTTAATCTTGAAAATGACAATTCTGCATCATCTGTTTCTGCAAATTGTGAATCTCTTGTTTCCAGGGATGCTCAGTCCCAAACTTATCCCAATGCAGAGAAGTCTATCTCAATTAAATCCGAGCTTACGGAAGTAAAAGCAGAAGTTTTGGCTCATGCTAAGCTTAGGGATATGAAGATGGATTCCAATAATACAGATGATAAAATTCTTGATGGTAAGTCTGCCAAGAATGAT 1929 0.4163 GNMSSMGVPRISSQMIPTPGFTVNSNHSHMNIDSSTNGSVFSSADSTMVPQSQLEQQKQHIGDQSHVLPNLGSQMSSGMRSGTSDGYASNYANSPKHIHQHFDQNQKPVVQGDGYGLNNVDPFASGNFYASATSSGSMMNTQNTNSVKLPSIPKTSSLISGHSNLHGMQQAAHIKSQAINQLEKLNFQSSSTSRDALLHSQQQYPQRPQQFQQPEQYSQSQQQFQLKLHSQQPQHLVNDDAFNQSQLSSNLENQVKSEPGIEHHKDLLNSHVPEQFHMSEMQNQFQQNSSEDCSRSAQYISFPSGQHDLSSSAPQNSQQMLHPHQLVAESQNKFSCLTVGAQSNSKSVVLNQWPDSQDGNHMSNNISHDQHLHVDFHQRISGKDEAHCNNLSSDVSMGQAVAPRGATESLDPGSATKKAHRNQQRWLLFLLHARKCSAPEGRCQEHSCSSARKLCKHIDGCTLRHCPVPRCHHTRVLLHHFIHCKDPCCPVCVFVKNYRRAFQLKPQIQPESESSLPSVVNGSCKSYNITATSSRLISKPTLVVETSEDLHPSLKRIKIEHCTQSVNLENDNSASSVSANCESLVSRDAQSQTYPNAEKSISIKSELTEVKAEVLAHAKLRDMKMDSNNTDDKILDGKSAKND 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme4064g00001 643 SUPERFAMILY TAZ domain 416 499 IPR035898 -
Trme4064g00001 643 PANTHER CBP/P300-RELATED 219 620 IPR013178 GO:0004402|GO:0006355|GO:0016573
Trme4064g00001 643 Pfam TAZ zinc finger 424 492 IPR000197 -
Trme4064g00001 643 MobiDBLite consensus disorder prediction 190 233 - -
Trme4064g00001 643 SMART TAZ_2 417 495 IPR000197 -
Trme4064g00001 643 MobiDBLite consensus disorder prediction 1 94 - -
Trme4064g00001 643 Gene3D TAZ domain 413 520 IPR035898 -
Trme4064g00001 643 ProSiteProfiles Zinc finger TAZ-type profile. 414 495 IPR000197 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Trme4064g00001 zf-TAZ 1.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme4064g00001 K04498 - gmx:100809207 913.294