Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme40632g00001 GCAAGAGAAGGAGCTTTTGAGTTGAATGATGTTTTTGCAATAATCAATGCTGTCCCTGCTATCGCTCTCCTTAACTTTGGTTTCTTTCACAAAGGTCTCATCCCTGGCCTTTGCTTTGGTGCGGGTCTTGGGATTACGGTGTTTGGGATGGCCTACATGTTTGTACACGACGGATTGGTTCATAAGAGATTCTCAGTGGGACCCATTGCCAATGTACCCTATTTCAGAAGGGTAGCTGCTGCCCACAAACTTCACCATTCAGACAAATTCGATGGGGTGCCATATGGGCTGTTTTTGGGACCAAAGGAACTTGAAGAGGTGGGAGGGTTAGAAGAGCTAGAGAAAGAGATAAGTAGGAGGACAAAATCATNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNTTTAAAAAGTTATCATTGTAA 438 0.3927 AREGAFELNDVFAIINAVPAIALLNFGFFHKGLIPGLCFGAGLGITVFGMAYMFVHDGLVHKRFSVGPIANVPYFRRVAAAHKLHHSDKFDGVPYGLFLGPKELEEVGGLEELEKEISRRTKSXXXXXXXXXXXXXXXXFKKLSL 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme40632g00001 145 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 123 IPR045019 GO:0016491
Trme40632g00001 145 Coils Coil 110 123 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme40632g00001 40 122 Chloroplast and Mitochondria Gene Families AT5G52570 86.747 1.71e-40 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme40632g00001 K15746 - twl:119983767 227.639