Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme405699g00001 ATGTTGAGATGCATTAAAGTTGAAAATAAGCTTCTTTTGACTGGGACACCTCTCCAGAATAATTTGGCAGAGCTTTGGTCATTGCTGAACTTCATCTTACCTGATATATTCTCATCACTTGAAGAATTTGAGAAATG 137 0.3577 MLRCIKVENKLLLTGTPLQNNLAELWSLLNFILPDIFSSLEEFEK 45
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme405699g00001 45 Gene3D - 1 45 IPR038718 -
Trme405699g00001 45 Pfam SNF2-related domain 2 45 IPR000330 GO:0005524|GO:0140658
Trme405699g00001 45 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 45 IPR027417 -
Trme405699g00001 45 PANTHER LYMPHOID-SPECIFIC HELICASE 2 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme405699g00001 Trme-Chr405699 128 264 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Trme405699g00001 SNF2_N 2.2e-12 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme405699g00001 K19001 - gmx:100817842 80.4925