Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme40495g00001 ATGGAAAAGAAGGGAAGTGTGTTAATGCAAAGATATGAGCTGGGAAGATTATTAGGCCAAGGAACGTTTGCGAAGGTCTACCATGCTAGGAACCTTGTAACTGGCATGAATGTGGCCATTAAGGTAGTTGATAAAGAAAAGGTTTTGAAAGTCGGGATGGTTGAACAGATTAAGCGTGAAATTTCAGTGATGAGATTAGTAAGACACCCAAATGTGGTTGAGCTTTATGAGGTAATGGCGACTAAAACCAAAATTTTCATTGTCATGGAGTATGCAAAAGGTGGCGAGCTCTTTAACAAGATAGCTAAAGGAAAGCTCAAGGTTGACGTTGCTAGGAGATATTTTCAGCAGCTGATTAGTGCAGTTGACTTCTGCCACAGCAGGG 385 0.413 MEKKGSVLMQRYELGRLLGQGTFAKVYHARNLVTGMNVAIKVVDKEKVLKVGMVEQIKREISVMRLVRHPNVVELYEVMATKTKIFIVMEYAKGGELFNKIAKGKLKVDVARRYFQQLISAVDFCHSR 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme40495g00001 128 SUPERFAMILY Protein kinase-like (PK-like) 8 128 IPR011009 -
Trme40495g00001 128 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Trme40495g00001 128 Gene3D Transferase(Phosphotransferase) domain 1 2 128 - -
Trme40495g00001 128 ProSiteProfiles Protein kinase domain profile. 12 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme40495g00001 128 Pfam Protein kinase domain 12 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme40495g00001 128 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 128 - -
Trme40495g00001 128 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Trme40495g00001 128 SMART serkin_6 12 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme40495g00001 Trme-Chr40495 139 523 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme40495g00001 1 128 CBL-interacting serine-threonine protein kinases AT5G01810 77.344 2.15e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Trme40495g00001 Pkinase 5.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme40495g00001 K07198 - gmx:100811923 230.72