Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme40467g00001 ATGAAGAAAATTCTTTATTTGGGCAATACATTGAATCAAGGAACAGCAAGGGGATCTGCTGTTGGATTCAAGTTGGATAGCCTTTTAAAGCTCACCGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTTTGCAAGGTCCTAGCTGAAAAGTCTCCTCCACTCCTTGATTTTCACCATGACCTAGTTAGCGTAGAGACTGCCTCTAAG 219 0.4155 MKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLAEKSPPLLDFHHDLVSVETASK 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme40467g00001 73 PANTHER FORMIN-J 1 73 - -
Trme40467g00001 73 Gene3D Formin, FH2 domain 1 73 IPR042201 -
Trme40467g00001 73 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 73 IPR015425 -
Trme40467g00001 73 Pfam Formin Homology 2 Domain 1 73 IPR015425 -
Trme40467g00001 73 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme40467g00001 Trme-Chr40467 433 918 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme40467g00001 1 73 FH2 protein (formin) Gene Family AT5G07740 82.192 1.70e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme40467g00001 - - tpra:123913936 143.665