Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme40464g00001 ATGGCTGCGAAGACTAAAAGGCCTCGACCACCGAGTGAAATTCCCGACGTTGACACAACATCAACTGCCTCTATTTACTGGGATGCTAGACTGACACCGACTGATAAGACACAACATAGCGTTTTAGCTGAAAGCCAAAAAAGCGATAACACTGGTATGTGGCATCATAAGAAAACTGATATTACGAATAGTAAAAGCAACAGCAACACTTTATTTAGGAATCATACAGAAGGAAGTTGGCTATCTTCTCCCCATTCTAGCTGTCCTCATTTGCTTCACGACACAACCGATGGTCGTGTGCTCGATCAAGCTGACAAGGACAACAAAGCCGAGACTGCTACAAGTTATCGGTTGTTTGGAATCGATCTTATTGATCATTCCAAAAATTCGGCTGCTCTAGGGAAAGGATCATCACATGTGGCAAACATAACTGGAGTTACCGCTGAAGTTAGTTCCAGTACTTTGTCCAGCATCGATACTGGCCGTAAGTCTGACATCTCAAAGGCTGCTTCTATGGAGAAGAAACAAGATTTGCAACTAGTATCACCGAAGGAGACTCAAAGCAAGCAAATTTGTAGCAGAAGTCGCACCAAG 594 0.436 MAAKTKRPRPPSEIPDVDTTSTASIYWDARLTPTDKTQHSVLAESQKSDNTGMWHHKKTDITNSKSNSNTLFRNHTEGSWLSSPHSSCPHLLHDTTDGRVLDQADKDNKAETATSYRLFGIDLIDHSKNSAALGKGSSHVANITGVTAEVSSSTLSSIDTGRKSDISKAASMEKKQDLQLVSPKETQSKQICSRSRTK 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme40464g00001 198 MobiDBLite consensus disorder prediction 181 198 - -
Trme40464g00001 198 MobiDBLite consensus disorder prediction 1 21 - -
Trme40464g00001 198 MobiDBLite consensus disorder prediction 35 70 - -
Trme40464g00001 198 MobiDBLite consensus disorder prediction 166 198 - -
Trme40464g00001 198 MobiDBLite consensus disorder prediction 35 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme40464g00001 Trme-Chr40464 141 821 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme40464g00001 1 198 B3 DNA Binding Superfamily AT4G23980 32.161 1.34e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme40464g00001 K14486 - gmx:100803911 228.794