Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme40365g00001 ATGTATGGAGAGGCTTTTCCTGATTTTCTGGATAGAATCTCAATGGAGGAAACATCTGAAAAGGAAGACAAGTTTATGAGTTGGGTGGCAACAATCAGTCATAATARAGCTTACATATATTCAGGATCRGCATATTTCGGAAAMACGCTCATACACGGGAACGAAAGTAAATATATTGAGAGTGTAGTTGGCTGTGTTACTTATGTGATAAGCAAGAAGAGAGCTTTGTTCGATGGTTCATATACAGAGAGCAAAACTTCTCGTGCACAAGATGCGATTCAACTATTGAATCGGTCAAAATGTCCTCTCCTACTAGGGATATGGGGGATGACAGGGATTGGTAAATCAACCATTGCCGAAGCCATTTTTTGTCAGATTAGTCCCTATTTTGAGGAAAAGTGTTTTCTCAAAAACGTGGGAGTTTGGGAAAGATCAAGTGGTCTAGTTTCTTTACAACAGCAACTTCTTGGTGGTATTGACAGAACAACTGAAATAAAGATACCTACAATTGAATCAGGAAGAGTGATTTTAAAAGAAACACTTCGAGGTAAAAGGGTACTTCTTGTACTTGACAATGTTGATAGATTGGAGCAGCTAAATGCTTTGTACGAAAGTCCTGAATGGTTTGGTGCCGGTAGCAAAATAATAATCACAACAAGAGATAGACATCTACTCAAGGAGCATGGAGTTGAGCATATATACAAAGTGAAAGAAC 715 0.3818 MYGEAFPDFLDRISMEETSEKEDKFMSWVATISHNXAYIYSGSAYFGXTLIHGNESKYIESVVGCVTYVISKKRALFDGSYTESKTSRAQDAIQLLNRSKCPLLLGIWGMTGIGKSTIAEAIFCQISPYFEEKCFLKNVGVWERSSGLVSLQQQLLGGIDRTTEIKIPTIESGRVILKETLRGKRVLLVLDNVDRLEQLNALYESPEWFGAGSKIIITTRDRHLLKEHGVEHIYKVKE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme40365g00001 238 SMART AAA_5 101 238 IPR003593 GO:0016887
Trme40365g00001 238 Gene3D - 72 233 IPR027417 -
Trme40365g00001 238 Pfam NB-ARC domain 95 231 IPR002182 GO:0043531
Trme40365g00001 238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 237 IPR027417 -
Trme40365g00001 238 PRINTS Disease resistance protein signature 180 194 - -
Trme40365g00001 238 PRINTS Disease resistance protein signature 104 119 - -
Trme40365g00001 238 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 40 226 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme40365g00001 Trme-Chr40365 1 913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme40365g00001 105 237 WRKY Transcription Factor Family AT4G12020 33.333 5.74e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme40365g00001 - - mtr:11412606 263.077