Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme40356g00001 CCCGCAGGAGAGGTGCCTCCGACTCCTTTTGGTTCATTTACTCATGTCGAAGAGCGATCCCAAGGGAAAACTACTAGGAACTCTGGAGATGAGAGTGAAGAAAAACCTATACACAAAATCATAACTTCTAAGGCTGAAGCATGGATTCAAAAGAAAACTATGTCATGGCCATGGAAAGCAAATGATCGGGAAGAATCCGAGTCAAAGAACGTTCGTGTTTCTTGGCCTTGGTTGCAGGGTGATCAAGAAAAAGAGTCAACTAATCAGAAGAATCTGTCTTCTGGATTGAAGCAGCCCGAAAGCCGGACTGTTGAAAGTTATCAACATGTTCAAAATGAGGCTTCAGGAGGATCCTGGTCCTCCTTCAATGTTAACAGCACAAGTAGTACCAGCAGTTGCGGGAGTGGCAGTGGTAGCAGTTCTGCTGCTAATAATAGAGTGGATGTTGATTCTGATTGTTTAGATTACGAAATTTTATGGGAGGACCTTACAATTGGAGAGTCTATTGGACAAGGTTCTTGTGGAACTGTATACCATGCTCTGTGGTATGGATCAGATGTTGCTGTAAAGGTTTTCTCGAAGCAAGAATATTCAGAAGATGTAATACAGTCCTTCAGACAAGAGGTGTGTTCTCTTGTAGTCTAA 645 0.4279 PAGEVPPTPFGSFTHVEERSQGKTTRNSGDESEEKPIHKIITSKAEAWIQKKTMSWPWKANDREESESKNVRVSWPWLQGDQEKESTNQKNLSSGLKQPESRTVESYQHVQNEASGGSWSSFNVNSTSSTSSCGSGSGSSSAANNRVDVDSDCLDYEILWEDLTIGESIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEDVIQSFRQEVCSLVV 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme40356g00001 214 MobiDBLite consensus disorder prediction 72 121 - -
Trme40356g00001 214 SUPERFAMILY Protein kinase-like (PK-like) 151 212 IPR011009 -
Trme40356g00001 214 MobiDBLite consensus disorder prediction 19 41 - -
Trme40356g00001 214 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 67 209 - -
Trme40356g00001 214 MobiDBLite consensus disorder prediction 1 121 - -
Trme40356g00001 214 Gene3D Phosphorylase Kinase; domain 1 156 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme40356g00001 Trme-Chr40356 1 941 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme40356g00001 1 212 MAP Kinase Kinase Kinase AT3G06620 53.991 2.11e-61 202