Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme403300g00001 ATGGCGGACGAAGATGTCTCATCAAGCAGGAAACGAAGGCCAACAAGAGGACCCGACGCCACCGCCCGGAGCCAAGCATTAGAGCTTCTCAGATCCCGCCGATCCGGCGGTCCCCGATCCGACGCCGCCCTACCTCAAATCAGGTTAGAAAACCCTATCTACGACACAATCCCCGAAGATGAATACAATGCCCTAGTTGCTAGTCGCCGCGATCAAGCGCGCTCCTTCATCGTCGACGATCAAGGAATCGGTTACGGCGATGAAGGT 267 0.5655 MADEDVSSSRKRRPTRGPDATARSQALELLRSRRSGGPRSDAALPQIRLENPIYDTIPEDEYNALVASRRDQARSFIVDDQGIGYGDEG 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme403300g00001 89 MobiDBLite consensus disorder prediction 1 18 - -
Trme403300g00001 89 MobiDBLite consensus disorder prediction 1 24 - -
Trme403300g00001 89 Pfam DNA polymerase alpha subunit p180 N terminal 27 89 IPR024647 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme403300g00001 Trme-Chr403300 1 267 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme403300g00001 5 89 Core DNA Replication Machinery Family AT5G67100 46.067 3.62e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme403300g00001 K02320 - lja:Lj3g3v0931330.1 130.183