Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme40306g00001 ATTTCTAAAGCATGGGAGCTTCCTGTCTCAACTCTCCTAAGATTGACGATCCCTCAACCAGCACCATCGCAATGGAGCAGATTTTATGCATCAGCCAATATCGCTCTTTGTCCTCTAGCCCTCTTGTATGCATGCAACTCATTCGTGCCACTTAATCATCCCATAGTTTTCCTCCTCCCCAATACTCTTTTCCCTCTTTGGTCCGTAGTGCTCATGACAAGCTTCTCTCTTGCATTTCTTCATTTTGTAATGGAAAAAGAACCCCCAAAAGCAGAGCATTTGCCTGTGGTGGTCGTGGCATTTGTGATGAGTGTGTTTTGGATATCTACCACAGCTGGAGAGCTGGTGAATTGCCTCGAAGCTTTAGGTACGCTTCTCAAAGTTCCAGCATCATTCCTTGGTCTTACGGTGCTGGCATGGGGAAATTCAGTGGGGGATCTTGTTGCTGATGTTGCAGTTGCTAAAGCTGGTCATCCGGCAATGGCAATGGCTGGATGCTTTGCTGGACCGATGTTTAACATGCTTGTTGGTCTTGGAACTGCTTTGGTCATACAGACGACAAATACATATCCTAAAGCCTATGAACTTAATTTCCATGTTGGTATAGTGATTGCATTTGTGTTCCTTCTTTTAAGCCTCATGGGGTCTCTCTTGGTAATCACTTGGTCCCGATTCCGAGTGCCTAGGTTTTGGGGATTCTGTCTCGTGGGCCTCTATATTGTTTTTATGGCAGTGAGTTCGGTAGTTGCCATCTTTTCAAGTTGA 765 0.4536 ISKAWELPVSTLLRLTIPQPAPSQWSRFYASANIALCPLALLYACNSFVPLNHPIVFLLPNTLFPLWSVVLMTSFSLAFLHFVMEKEPPKAEHLPVVVVAFVMSVFWISTTAGELVNCLEALGTLLKVPASFLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGTALVIQTTNTYPKAYELNFHVGIVIAFVFLLLSLMGSLLVITWSRFRVPRFWGFCLVGLYIVFMAVSSVVAIFSS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme40306g00001 254 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 3 252 - -
Trme40306g00001 254 Gene3D - 30 249 IPR044880 -
Trme40306g00001 254 Pfam Sodium/calcium exchanger protein 97 246 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme40306g00001 Trme-Chr40306 200 964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme40306g00001 1 254 Antiporters AT1G08960 77.953 9.13e-134 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme40306g00001 K13754 - gmx:100775437 443.736