Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme40258g00001 GTCGAGGATGATTATAGTGATGAAGAAATGGATGTGGATGAGCTTGAACGAAGGATGTGGAGGGACAAAATGCGTCTCAAGCGATTGAAAGAGCAAACCAAGGCTAAAGAAGGAATTGATGCCGCAAAGGCAAGGCAGTCTCAGGAACAGGCAAGGAGGAAAAAGATGTCAAGAGCTCAAGATGGAATATTGAAGTACATGCTGAAAATGATGGAGGTTTGTAAGGCACAGGGATTTGTTTACGGGATAATTCCCGAGAAGGGAAAACCGGTGACTGGAGCTTCTGACAATCTTCGTGAATGGTGGAAGGATAAGGTTCGGTTCGATAGGAATGGTCCGGCTGCCATATCCAAGTATCAAGCAGATAACGCAATTCCAGGGAAGAATGATGGATGCAATTCCATCGGTCCAACTCCTCACACCTTGCAAGAATTACAGGACACAACCTTAGGTTCTCTCTTATCTGCACTTATGCAGCACTGTGATCCTCCTCAGAGGCGTTTCCCATTAGAGAAGGGTGTTCCTCCACCATGGTGGCCAACCGGAAACGAAGAGTGGTGGCCACAGATCGGTTTGCCTAAAGATCAAGGACCTCCACCATACAAGAAACCTCATGATCTGAAAAAAGCATGGAAAGTCGGTGTTCTAACTGCGGTTATCAAGCATATGTCTCCTGATATAGCCAAGATTCGCAAGCTTGTGAGGCAGTCCAAATGCCTTCAAGATAAAATGACGGCCAAGGAAAGTGCAACCTGGCTTGCTATCATCAACCAAGAGGANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNTATGATGTCGATAGGGCTGAGGATGAGTCAAACTTTGACGTGGATGACCGAAAACCCGAGAATCTTCATCCATCCAATCTTGGGATGGACAGGATGAGGGAAAGGTTTCCAGTTCAGCAACCTTCTCCTCCAATCAAGGGAGAGGTTGAGGTTATCACAAACTTGGATTTCATTCG 1046 0.4226 VEDDYSDEEMDVDELERRMWRDKMRLKRLKEQTKAKEGIDAAKARQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAISKYQADNAIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDVDRAEDESNFDVDDRKPENLHPSNLGMDRMRERFPVQQPSPPIKGEVEVITNLDFIR 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme40258g00001 349 MobiDBLite consensus disorder prediction 292 318 - -
Trme40258g00001 349 Gene3D - 45 123 IPR023278 GO:0003700|GO:0005634
Trme40258g00001 349 MobiDBLite consensus disorder prediction 32 56 - -
Trme40258g00001 349 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 2 335 IPR006957 GO:0003700|GO:0005634
Trme40258g00001 349 Coils Coil 253 259 - -
Trme40258g00001 349 FunFam Ethylene insensitive 3-like 1 133 268 - -
Trme40258g00001 349 FunFam Ethylene insensitive 3-like 1 45 123 - -
Trme40258g00001 349 Pfam Ethylene insensitive 3 13 259 IPR047091 GO:0003700
Trme40258g00001 349 SUPERFAMILY DNA-binding domain of EIN3-like 139 261 IPR023278 GO:0003700|GO:0005634
Trme40258g00001 349 Coils Coil 12 32 - -
Trme40258g00001 349 Coils Coil 291 299 - -
Trme40258g00001 349 Gene3D - 137 267 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme40258g00001 Trme-Chr40258 1 1046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme40258g00001 1 339 EIL Transcription Factor Family AT3G20770 75.294 0.0 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Trme40258g00001 EIN3 1.5e-131 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme40258g00001 K14514 - gmx:100798037 607.831