Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme40216g00001 ATGATGGATAGATGGACTACTCGAATCAACTCCGGAAACCTCGAAATTGATATCGAAAGAGAGATCGTTGCAACCGCAGGAGAGATCATAGCAAGAACAAGCTTTGGTATAAATGATGACAATGCAAGAAAAATTTGTGAAAAATTACGTGCCCTACAAATGGCACTTTTCAAGACAACAAGATATGTAGGTGTTCCATATATAAAGTTCATTGACATCAAAAAAACCCTAGAGGCAATGAAACTTGGGAAGGAGATAGATAAGCTTTTGCTTTATTTCATAGAAAGTAGAAAGGAATCAAAAATTATAAGAAAAGGTAGAGAAGATTTGTTGGATTTATTGTTGCATGAAAATCAAGTTGATGGAAAGTATGGAAAAAGATTGAGCACAAAAGAATTGGTGGATGAATGCAAGACATTCTTCTTTGCTGGTCATGAGACAACAGCATTGGCTATTTCTTGGACTTTGATGCTTTTAGCTATGAATGAAGATTGGCAAAATCAATTGAGAGATGAGATAAGAGAAGTGGTTGGTGATAAAGAAGTTGATATCAATGTGCTTGCTGGTTTGAAAAAG 576 0.3524 MMDRWTTRINSGNLEIDIEREIVATAGEIIARTSFGINDDNARKICEKLRALQMALFKTTRYVGVPYIKFIDIKKTLEAMKLGKEIDKLLLYFIESRKESKIIRKGREDLLDLLLHENQVDGKYGKRLSTKELVDECKTFFFAGHETTALAISWTLMLLAMNEDWQNQLRDEIREVVGDKEVDINVLAGLKK 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme40216g00001 192 PRINTS E-class P450 group I signature 132 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme40216g00001 192 PRINTS E-class P450 group I signature 152 178 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme40216g00001 192 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 183 - -
Trme40216g00001 192 Pfam Cytochrome P450 1 183 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme40216g00001 192 SUPERFAMILY Cytochrome P450 1 186 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme40216g00001 192 Gene3D Cytochrome P450 1 192 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme40216g00001 Trme-Chr40216 466 1041 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme40216g00001 1 192 Cytochrome P450 AT5G52400 54.872 2.28e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme40216g00001 - - qsa:O6P43_004292 271.552