Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme40204g00001 GAGGAGGAGATGGAAGAGATGGAGGATATTGAGCCGCCGCCAGCTTCTGTTCCTTTTTCTCAACTCTTTGCTTGTGCTGACCGGTTTGACTGGTTTCTTATGGTGGTTGGCTCTGTCGCCGCTGCTGCTCACGGCACTGCTCTTGTTGTTTACTTGCACTACTTTGCTAAAGTTATTCAGGTTCCTCAATATCCACAGCAGGATCAGTTTCATAGAACTTGGTTTGTCCACCACCCGATGATGACTGATAAGATTGATGCCGGAGCTAGTCCATTATTGGTTGGACGTGAGACGTGCAGCTCTTCCCTCTCATTTCATGAGCTCACATTTTCCAGGATGCAAACATTGAAAACAGTTAGTTATAGTGTTTCCTGGGGCGATTGA 384 0.4688 EEEMEEMEDIEPPPASVPFSQLFACADRFDWFLMVVGSVAAAAHGTALVVYLHYFAKVIQVPQYPQQDQFHRTWFVHHPMMTDKIDAGASPLLVGRETCSSSLSFHELTFSRMQTLKTVSYSVSWGD 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme40204g00001 127 Gene3D ABC transporter type 1, transmembrane domain 11 93 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme40204g00001 Trme-Chr40204 1 838 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme40204g00001 11 59 Calmodulin-binding Proteins AT2G36910 42.308 2.40e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme40204g00001 K05658 - gmx:100779000 114.775