Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme40193g00001 ATGAATGGAAGAAACAGGCATCCTTTTACTCCAACTCAGTGGCAAGAGCTTGAACATCAAGCTCTTATCTACAAATACATGGCTTCTGGTATTTCCATTCCACCTGATCTTCTACTCACCATCAAAAGAAGCTACTTAGACTCTTCAAGGCTCTTACCTCACCACTCTCAACACT 175 0.4171 MNGRNRHPFTPTQWQELEHQALIYKYMASGISIPPDLLLTIKRSYLDSSRLLPHHSQH 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme40193g00001 58 SMART QLQ_2 7 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Trme40193g00001 58 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Trme40193g00001 58 Pfam QLQ 8 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Trme40193g00001 58 PANTHER GROWTH-REGULATING FACTOR 5 7 53 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme40193g00001 Trme-Chr40193 242 416 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme40193g00001 6 56 GRF Transcription Factor Family AT3G13960 68.519 3.33e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme40193g00001 - - cam:101508073 108.997