Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme40166g00001 GTGATTAGTGAGCCAAATGCAAGTGCTTGGAAAATAGGACTGGATACATCACTTGCATCCATCCTTTGCTCGGGGGCTGTATATGTTGCAATGTTCAAACCACTCTCAATTGTCATAGCTGTTGCCATGGGAGTTGTGTTCCTTGGTGATACTCTCCATCTTGGAAGTTTAATCGGAGCTACAATAATATCGATTGGATTCTATACTGTAATGTGGGGAAAAGCAACAGAAGAGGTGGTTGAAGATGTCCCTATCCACGAAACAACAACTACACAAAATGCTCCTCTCTTGCAAAGCTATAAAACTGAAGTTGAAAACAAAATGCATACAAGTGTATAA 339 0.4041 VISEPNASAWKIGLDTSLASILCSGAVYVAMFKPLSIVIAVAMGVVFLGDTLHLGSLIGATIISIGFYTVMWGKATEEVVEDVPIHETTTTQNAPLLQSYKTEVENKMHTSV 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme40166g00001 112 SUPERFAMILY Multidrug resistance efflux transporter EmrE 25 74 - -
Trme40166g00001 112 PANTHER WAT1-RELATED PROTEIN 4 88 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme40166g00001 Trme-Chr40166 119 1040 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme40166g00001 9 103 Nodulin-like Gene Family AT3G28050 48.413 8.10e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme40166g00001 - - gmx:100814137 155.221