Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme39988g00001 ATGCAGGTGAGTCTTGTTGCTGCTAGAAAGAACCATGCTTCAGAGAATGGCACTGTTCAACCTGTAAGACATGATCTTGTGTCACCTCGCTACTATGATTCTGAAAATGCTACTTCCATGGAATCTCGAACAACTGATGGGAGCACACCTATGAAGCTGTCTGGTAGTTTTTCGGTCTCTGATGCAGGGAGGCAGGCTAATGGTGCTTTGACTACAGTGAGCAATCTGATGAAGGAATTTGAGCAGCGAAGACAGACCTTCAATGATGAAGTTAAAGCTTTGAATGAGGTTAAACCAGGGCAGTCTGCCAACACAAATTCTGCTGATGAACTTCGGAAACTTAAGCAAAGATTTGAGGGATGGAAGAAACAATACAAGGTTAGATTACGGGAGACAAAAGCAAGGCTTTCCGAAAACGAAAAAAGTCGATGGACATGGTGGGGGAAATTAAGCTTGAAAGCATAA 465 0.4323 MQVSLVAARKNHASENGTVQPVRHDLVSPRYYDSENATSMESRTTDGSTPMKLSGSFSVSDAGRQANGALTTVSNLMKEFEQRRQTFNDEVKALNEVKPGQSANTNSADELRKLKQRFEGWKKQYKVRLRETKARLSENEKSRWTWWGKLSLKA 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme39988g00001 154 Coils Coil 77 97 - -
Trme39988g00001 154 MobiDBLite consensus disorder prediction 34 61 - -
Trme39988g00001 154 Coils Coil 122 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme39988g00001 Trme-Chr39988 368 832 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme39988g00001 1 149 Myosins gene family AT5G54280 43.478 2.66e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme39988g00001 K10357 - gmx:100802074 227.254