Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme39963g00001 ATGGCTGCTGAGATTTTGTCAAACCAACCACCGATCAAACGTGGGACTAATCCGCTTGTAGGAGGGTTGATTCAGTCTTGTGTTCACTTCTTTCGTATCGGTTTCGTTTACTTGCTTATGCTTGCTGTTATGTCCTTCAATGTTGGAATCTTTTTTGCTGCTGTTTTTGGTCATACTTTGGGGTTTTTTGTTACGCGGTCGCGTGCTATTGCTCTTGCTAATGGGGAAGATCAACGATCCTTGTCTGATACAATCAAAATTTGA 264 0.4205 MAAEILSNQPPIKRGTNPLVGGLIQSCVHFFRIGFVYLLMLAVMSFNVGIFFAAVFGHTLGFFVTRSRAIALANGEDQRSLSDTIKI 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme39963g00001 87 Pfam Ctr copper transporter family 14 64 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trme39963g00001 87 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 8 72 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme39963g00001 Trme-Chr39963 32 295 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme39963g00001 3 69 Inorganic Solute Cotransporters AT5G59040 49.254 3.53e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme39963g00001 K14686 - gmx:100813144 115.931