Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme39930g00001 ATGCCAATTAACCTTCCTGGAACACTCTTCCACAAAGCAATGAAAGCAAGGAATGAGCTTGCACAGATCTTAGCTCAAATAATCTCAAGTAGAAGAGAGAAGAAACAAGAATACAAAGATTTGTTAGGTTCATTCATGGATGAAAAATCAGGACTTACTGATGAACAAATAGCAGATAATGTAATTGGAGTTATATTTGCAGCTCGTGATACCACAGCTAGTGTGCTGACGTGGACTGTTAAGTACCTTGGTGAAAATATCAATGTCCTAGAAGCAGTGATTGAGGAACAAGAATCTATATTGAAGAGTAAGGAAGAAAATGGTGAAGAAAAAGGTCTTAAATGGGAAGATACAAAGAAAATGGTTATAACTTCAAGGGTTATTCAAGAGACTCTTAGAGTTGCTTCAATTTTGTCTTTCACTTTTAGAGAAGCAGTTGAAGATGTTGAATATCAAG 457 0.3567 MPINLPGTLFHKAMKARNELAQILAQIISSRREKKQEYKDLLGSFMDEKSGLTDEQIADNVIGVIFAARDTTASVLTWTVKYLGENINVLEAVIEEQESILKSKEENGEEKGLKWEDTKKMVITSRVIQETLRVASILSFTFREAVEDVEYQ 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme39930g00001 152 Coils Coil 87 107 - -
Trme39930g00001 152 Gene3D Cytochrome P450 1 152 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme39930g00001 152 Pfam Cytochrome P450 5 150 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme39930g00001 152 SUPERFAMILY Cytochrome P450 6 151 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme39930g00001 152 PANTHER CYTOCHROME P450 26 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme39930g00001 Trme-Chr39930 387 935 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme39930g00001 1 152 Cytochrome P450 AT5G45340 75.000 3.31e-75 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme39930g00001 K09843 - gmx:100170674 259.61