Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme39902g00001 ATGATTGCCCTGGTTATAATTTTCACTAGCATTATCAGTGGAACAGTGATGTCACATATACTAGAGCACACCACTTGGATTGACAGTTTCTATCTGTCAATCTCCTCGGTTACTACAGTCGGCTACGGCGACTATAGTTTTAAAACCGTAGCCGGAAGAACTTTGGCCATTGTTTGGCTGTTGATCAGTACTATATGCGTTAAAAAATCTTGTTTGTATCTTGCCGATTACTGTCAACAACAAAGACGCCGTATCAAAGAAGCAAAACAGATTCCTCCGCAGACATCACCAGCCGTCGCTGTCGCTCTTTCAGACAAGTTCAACCTGCTCAAATATAGAAGTATCGGGAAAAAGGATGATGTCAATATTAAGGAGTAG 378 0.4153 MIALVIIFTSIISGTVMSHILEHTTWIDSFYLSISSVTTVGYGDYSFKTVAGRTLAIVWLLISTICVKKSCLYLADYCQQQRRRIKEAKQIPPQTSPAVAVALSDKFNLLKYRSIGKKDDVNIKE 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme39902g00001 125 SUPERFAMILY Voltage-gated potassium channels 2 85 - -
Trme39902g00001 125 Pfam Ion channel 6 67 IPR013099 -
Trme39902g00001 125 Gene3D - 1 96 - -
Trme39902g00001 125 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 3 87 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme39902g00001 Trme-Chr39902 272 649 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme39902g00001 2 89 Ion Channels AT4G18160 46.591 3.33e-22 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme39902g00001 K05389 - rcu:8278112 103.605