Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme39801g00001 GCTAAAGTAAGATCTGGAAGTTACAGTGGAGGAATGAAACGTCGTCTTAGTGTTGCAATTGCTCTTATTGGTGACCCTAAATTAGTCATTTTGGATGAACCGACTACTGGTATGGATCCAATAACAAGGAGGCATGTATGGGACATAATTGAAAATGCAAAAAAAGGGCGTGCCATTATTCTCACAACACATTCTATGGAAGAAGCTGACATTCTAAGTGACCGAATAGGAATCATGGCAAAGGGAAGACTCCGCTGCATTGGCACCTCAATCAGATTGAAGTCACGCTTTGGTACTGGTTTTATTGCTAATATTAGCTTCTATGGAAACAATAATGAACATAGTCCTGCAAATAGTGATGCAATATCAGCAACACATCGTGAGGCCGTGAAGCAATTCTTTAAGAATCGTTTAGATGTAGTACCAAAAGAGGAGAACAATAACTTTCTAACTTATGTGATTCCTCATGAAAAAGAGGCGCTCCTTACAGTAAGCTTTCTTTTCTTGGCTGTGATTCCATTTCTTTTGAATCTGCTTAACACCAGGGTTTGA 552 0.3931 AKVRSGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKKGRAIILTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFIANISFYGNNNEHSPANSDAISATHREAVKQFFKNRLDVVPKEENNNFLTYVIPHEKEALLTVSFLFLAVIPFLLNLLNTRV 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme39801g00001 183 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 102 IPR027417 -
Trme39801g00001 183 Gene3D - 1 162 IPR027417 -
Trme39801g00001 183 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 2 157 IPR026082 GO:0016020|GO:0055085|GO:0140359
Trme39801g00001 183 Pfam AAA domain, putative AbiEii toxin, Type IV TA system 3 67 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme39801g00001 Trme-Chr39801 3 733 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme39801g00001 4 66 Calmodulin-binding Proteins AT2G36910 33.333 8.20e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme39801g00001 - - ccaj:109790891 301.597