Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme397149g00001 ATGAGCCAAAAAGTTAACAAGGAGGCAGAGTTTGCTTTTGGTGCCGGTCAAGTTAACCCAACAAGAGCTGTGAATCCTGGTTTAGTCTACGACATGGATGACTTCGCTTATATCCAGTTCTTATGCCACGAGGGATATAATGGTTCCACTTTATCAGTACTAATTGGTTCTCCAATAAATTGCACTTCTTTG 192 0.4115 MSQKVNKEAEFAFGAGQVNPTRAVNPGLVYDMDDFAYIQFLCHEGYNGSTLSVLIGSPINCTSL 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme397149g00001 64 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 61 IPR045051 -
Trme397149g00001 64 Gene3D Peptidase S8/S53 domain 2 34 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme397149g00001 Trme-Chr397149 1 192 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme397149g00001 1 62 Subtilisin-like Serine Gene Family AT5G59190 45.161 2.21e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme397149g00001 - - lja:Lj0g3v0004409.1 125.561