Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme39711g00001 ATGTTTGCACCTTATGGTGACTATTGGAAATTCATGAAAAAGATATGCATGTCAGAGCTTCTTGGTGGAAGAACTCTTGATCAATTCTGTCCCTTGAGACAACAAGAGACTTTGAGGTTACTTAGAGTTTTGCAGAAGAAAGGGAAAGCCGGTCGGGAGGCGGTTGATGTCGGTGCCGAGCTCTTGACATTAACCAATAGAATTATGACAAGGATGACAATAAGTAGAGCTTGTTGTGAAAATGATTGTGATGTTGAAGAGATTAGGAAGTTGGTTCAAGATTCTTCAGAACTTGCAGGGAAGTTTAATTTGTCTGATTTTATTTGGTTTTTTAAGAATTGGGATTTGCAGGGATTTAACAAAAGGCTAAAAGAGATGATGGAAAGGTTTGACACAATGATTGAGAGAGTGATAAGGGAGCATCAAGAGGATATGATGAAGAAAAGGAAGGAAAATGGTGAAGGTGCTCCTCATGTTAAGGATCTACTTGATATTTTGTTGGAAATTCAAGAGAATGAGAACTCTGAGAT 530 0.3811 MFAPYGDYWKFMKKICMSELLGGRTLDQFCPLRQQETLRLLRVLQKKGKAGREAVDVGAELLTLTNRIMTRMTISRACCENDCDVEEIRKLVQDSSELAGKFNLSDFIWFFKNWDLQGFNKRLKEMMERFDTMIERVIREHQEDMMKKRKENGEGAPHVKDLLDILLEIQENENSE 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme39711g00001 176 SUPERFAMILY Cytochrome P450 1 174 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme39711g00001 176 Coils Coil 120 140 - -
Trme39711g00001 176 Pfam Cytochrome P450 5 173 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme39711g00001 176 Gene3D Cytochrome P450 1 176 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme39711g00001 176 PANTHER CYTOCHROME P450 93A3-LIKE 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme39711g00001 Trme-Chr39711 1 530 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme39711g00001 3 176 Cytochrome P450 AT5G06900 42.614 7.16e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme39711g00001 K24188 - pvu:PHAVU_001G1395001 232.646