Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme39625g00001 ATGGGTTTTCGCTTATCTGGTACTAGACGACCATCATTTACTGCAAGTCAATCATCTAGCAAAGAAGTGGAAGTTCCAAAAGGCTATCTCGCAGTGTATGTTGGAGAGAAAATGAAGAGGTTCTTGATTCCAGTATCATTCTTAAATGAGCCTTCGTTTCAAGAATTTCTTAGCCAAGCTGAAGAGGAATTTGGTTACTGTCATCCGATGGGCGGTCTTACAATTCCCTGCAAGGAAGATGTCTTCTTACATACAGCTTCTCGCTTGAACGGACTGTAA 279 0.4158 MGFRLSGTRRPSFTASQSSSKEVEVPKGYLAVYVGEKMKRFLIPVSFLNEPSFQEFLSQAEEEFGYCHPMGGLTIPCKEDVFLHTASRLNGL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme39625g00001 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 89 IPR003676 GO:0009733
Trme39625g00001 92 MobiDBLite consensus disorder prediction 9 23 - -
Trme39625g00001 92 Pfam Auxin responsive protein 10 87 IPR003676 GO:0009733
Trme39625g00001 92 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme39625g00001 Trme-Chr39625 409 687 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme39625g00001 14 82 Calmodulin-binding Proteins AT3G43120 50.725 3.99e-18 72.4