Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme39615g00001 TTGCATATGGTAATTAATGAGTCAATGAGGCTCTATCCTCCAGCAACATTGCTCCCTAGAATGGCCTTTCAAGACATTGTTTTAGGTGACCTTTATATTCCTAAAGGCTTATCAATTTGGATTCCAGTTTTGGCTATTCATCATAGTGAAGAATTATGGGGTAAAGATGCAAATGAATTCAATCCACAAAGATTTGCTTCAAAATCATTCATGCCTGGTCGTTTCATACCATTTGCTTCTGGTCCAAGAAATTGTGTTGGACAATCATTTGCTATGATGGAAGCTAAGATTATATTGGCAATGTTGATCTCTAAGTTTAGCTTCACCATTTCAGATAATTATAAGCATGCACCAATCACTGTCCTCACAATTAAGCCCAAATATGGTGTTCAAATTTGTTTGAAGCCTTTAGATGCATAA 420 0.3595 MHMVINESMRLYPPATLLPRMAFQDIVLGDLYIPKGLSIWIPVLAIHHSEELWGKDANEFNPQRFASKSFMPGRFIPFASGPRNCVGQSFAMMEAKIILAMLISKFSFTISDNYKHAPITVLTIKPKYGVQICLKPLDA 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme39615g00001 139 PRINTS P450 superfamily signature 76 85 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme39615g00001 139 PRINTS P450 superfamily signature 3 14 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme39615g00001 139 PRINTS P450 superfamily signature 85 96 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme39615g00001 139 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 129 - -
Trme39615g00001 139 SUPERFAMILY Cytochrome P450 1 136 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme39615g00001 139 PRINTS E-class P450 group I signature 43 67 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme39615g00001 139 PRINTS E-class P450 group I signature 85 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme39615g00001 139 PRINTS E-class P450 group I signature 75 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme39615g00001 139 Pfam Cytochrome P450 2 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme39615g00001 139 Gene3D Cytochrome P450 1 139 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme39615g00001 Trme-Chr39615 601 1020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme39615g00001 3 132 Cytochrome P450 AT5G24900 50.746 3.78e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme39615g00001 K10717 - gmx:100812567 266.159