Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme395409g00001 GAGCCAAAGTTACCACAGTATTATTTCGGGAACGCGATTCAAAGCATTGCCACGTATGCATCAACGCGTGATGTGGTTGATAAAGATCTTACGTGGTGTGCGGAGCAGCTGAATAAGAGTGTGAAAGAGTATGATAATGCAACGGTAAGGCGCGTCGCAGAGAATTGGGACCTTGAGCCGAAGTGTTTTCCAATGGGGAATCATGATGGTGGGACATTGCAGATGGGTAGTTCGCATAGGTTTCTGATGTATGAGAATGATTTTGGATGGGGGAAACCGTTGGCGGTGAGGAGCGGTGGAGCTAATAA 308 0.474 EPKLPQYYFGNAIQSIATYASTRDVVDKDLTWCAEQLNKSVKEYDNATVRRVAENWDLEPKCFPMGNHDGGTLQMGSSHRFLMYENDFGWGKPLAVRSGGAN 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme395409g00001 102 Pfam Transferase family 1 99 - -
Trme395409g00001 102 Gene3D - 1 102 IPR023213 -
Trme395409g00001 102 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme395409g00001 Trme-Chr395409 1 308 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme395409g00001 1 100 Monolignol Biosynthesis Gene Families AT5G48930 27.885 2.81e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme395409g00001 - - cam:101506439 166.007