Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme39331g00001 ATGATCATTTGCAGGACTCATCCTGAAATATCAATTGAACAAGGTGAAGATTTAATTGATCATGAAGATTATGAAAATGTTGGTGGTGAAATCTCTGGAACCCAAGCTGCTACTGTCTATAGTAGTGTACCAAATGTTCAGGAGCTTGAGATGCTCTTAGGAGCATACTTTGTGCAAATTGGAGCCACATTGAACAAATTATCCGCGCTAGGTGAATATGTCGAGGACACAGAGGACTACATAAACATAACATTGGATGATAAACAGAACCGTATTCTACAAGCAGGAGTTCAGATAGGCACTGCAAGTGTGATTGTGAATTTCTTTGTTGTTGTGACAGGTATTTTTGGAATGAATATTCACATTGACATATTTGATGCTAAAGGGAATTCAGCATTCTTTGAGACAGTTTTTGGATGCACTGCTACTTGCATAATCTTATACTTCCTTGCCATGTTTTG 461 0.3774 MIICRTHPEISIEQGEDLIDHEDYENVGGEISGTQAATVYSSVPNVQELEMLLGAYFVQIGATLNKLSALGEYVEDTEDYINITLDDKQNRILQAGVQIGTASVIVNFFVVVTGIFGMNIHIDIFDAKGNSAFFETVFGCTATCIILYFLAMF 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme39331g00001 153 Gene3D Magnesium transport protein CorA, transmembrane region 11 92 - -
Trme39331g00001 153 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 38 152 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme39331g00001 Trme-Chr39331 50 782 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme39331g00001 33 152 MRS2 Gene Family AT3G19640 52.800 5.82e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme39331g00001 - - lja:Lj0g3v0356029.1 172.555