Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme393091g00001 ATGAAAATTGACGATCCCATGGCGGTGTTCCACACTCACGCAATAGCCGGTGCTCTTGGCGGAATTCTCACCGGCTTCTTTGCCGTGCCAAAATTATGTCGTCTCTTCTACATGGTGCCCGATTGGGAAAAATACATCGGCCTCGCCTATGGCCTACAAAATAGTGGTGCAACTCGAGCGG 181 0.5138 MKIDDPMAVFHTHAIAGALGGILTGFFAVPKLCRLFYMVPDWEKYIGLAYGLQNSGATRA 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme393091g00001 60 Gene3D Ammonium transporter AmtB like domains 1 58 IPR029020 -
Trme393091g00001 60 PANTHER AMMONIUM TRANSPORTER MEP2 2 49 IPR001905 GO:0008519|GO:0016020|GO:0072488
Trme393091g00001 60 SUPERFAMILY Ammonium transporter 1 38 - -
Trme393091g00001 60 Pfam Ammonium Transporter Family 1 33 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme393091g00001 2 40 Inorganic Solute Cotransporters AT2G38290 61.538 5.80e-11 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme393091g00001 K03320 - qsa:O6P43_007625 99.3673