Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme393039g00001 ATGAAGGTGAAGGAAGAAATGGGTTGGAAGCTTGGTCAAAGAGAGGCAAGTTTGTTGAGGTACAAAGAAAAGAGGCAAAGCAGACTCTTCGCTAAGAGGATCCGTTATGAAGTTCGCAAGTTGAATGCTGAAAAACGGCCTAGAATGAAG 150 0.4333 MKVKEEMGWKLGQREASLLRYKEKRQSRLFAKRIRYEVRKLNAEKRPRMK 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme393039g00001 50 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 8 50 - -
Trme393039g00001 50 Pfam CCT motif 14 50 IPR010402 GO:0005515
Trme393039g00001 50 ProSiteProfiles CCT domain profile. 14 50 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme393039g00001 Trme-Chr393039 113 262 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme393039g00001 12 50 C2C2-CO-like Transcription Factor Family AT1G73870 76.923 2.89e-15 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trme393039g00001 CCT 9.1e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme393039g00001 - - psat:127128050 97.4413