Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme39299g00001 ATGATACCAGTTGAACAATTGCACAAAATTTTCAAGCTTTGTGGCTCTCCACCCGACGAATACTGGAAAAAGACCAGACTTCCTCACGCAACTTTGTTCAAGCCACAACAACCATATGANAGTTGCCTAAGAGAAACATTTAAAGATTTTCCTGCAACCAGTGTAAATCTGTTACAAACTCTTCTTTCTGTTGAACCAAACAAACGCGGAACTGCCTCATCCGCTCTCTCGTCAGAGTATTTCAAAACAAAACCTTATGCATGTGACCCATCAAGCTTACCGGTATATCCACCTAGCAAAGAGATCGATGCAAAACACGAGGAGGAGACAAAAAGGAAAAAGATTGGTGGGAGAGTTGGTGGACCTGAATCAAGAAGAACATCAAGAAAGCC 392 0.4184 MIPVEQLHKIFKLCGSPPDEYWKKTRLPHATLFKPQQPYXSCLRETFKDFPATSVNLLQTLLSVEPNKRGTASSALSSEYFKTKPYACDPSSLPVYPPSKEIDAKHEEETKRKKIGGRVGGPESRRTSRKP 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme39299g00001 131 Gene3D Transferase(Phosphotransferase) domain 1 2 120 - -
Trme39299g00001 131 MobiDBLite consensus disorder prediction 84 131 - -
Trme39299g00001 131 MobiDBLite consensus disorder prediction 100 131 - -
Trme39299g00001 131 SUPERFAMILY Protein kinase-like (PK-like) 4 109 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme39299g00001 Trme-Chr39299 1 974 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme39299g00001 5 115 Core Cell Cycle Gene Families AT5G10270 40.833 7.89e-23 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme39299g00001 - - gmx:100784406 232.646